Navarro AM, Alonso M, Martínez-Pérez E, Lazar T, Gibson TJ, Iserte JA, Tompa P, Marino-Buslje C. Unveiling the complexity of cis-tegulation mechanisms in kinases: A comprehensive analysis. Proteins. 2025;93(3):575-587 https://doi.org/10.1002/prot.26751 Research article PubMed

Orti F, Fernández ML, Marino-Buslje C. MLOsMetaDB, a meta-database to centralize the information on liquid–liquid phase separation proteins and membraneless organelles. Protein Science. 2024;33(1):e4858. https://doi.org/10.1002/pro.4858  Research article PubMed

The Critical Assessment of Genome Interpretation Consortium (Marino Buslje C). CAGI, the critical assessment of genome interpretation, establishes progress and prospects for computational genetic variant interpretation methods. Genome Biology. 2024;25(1):53. https://doi.org/10.1186/s13059-023-03113-6 Comment PubMed

Bertran-Alamillo J, Giménez-Capitán A, Román R, Talbot S, Whiteley R, Floc'h N, Martínez-Pérez E, Martin MJ, Smith PD, Sullivan I, Terp MG, Saeh J, Marino-Buslje C, Fabbri G, Guo G, Xu M, Tornador C, Aguilar-Hernández A, Reguart N, Ditzel HJ, Martínez-Bueno A, Nabau-Moretó N, Gascó A, Rosell R, Pease JE, Polanska UM, Travers J, Urosevic J, Molina-Vila MA. BID expression determines the apoptotic fate of cancer cells after abrogation of the spindle assembly checkpoint by AURKB or TTK inhibitors. Molecular  Cancer. 2023;22(1):110. https://doi.org/10.1186/s12943-023-01815-w  Research article   PubMed

Martínez-Pérez E, Pajkos M, Tosatto SCE, Gibson TJ, Dosztanyi Z, Marino-Buslje C. Pipeline for transferring annotations between proteins beyond globular domains. Protein Science. 2023;32(7):e4655.      https://doi.org/10.1002/pro.4655   Research article   PubMed

Piovesan D, Del Conte A, Clementel D, Monzón AM, Bevilacqua M, Aspromonte MC, Iserte JA, Orti FE, Marino-Buslje C, Tosatto SCE. MobiDB: 10 years of intrinsically disordered proteins. Nucleic Acids Research. 2023;51(D1):D438-D444. https://doi.org/10.1093/nar/gkac1065  Research article  PubMed

Zea DJ, Teppa E, Marino-Buslje C. Easy not easy: Comparative modeling with high-sequence identity templates. Methods in Molecular Biology. 2023;2627:83-100.  https://doi.org/10.1007/978-1-0716-2974-1_5  Protocol   PubMed      

Fernández-Acosta M, Romero JI, Bernabó G, Velázquez-Campos GM, González N, Mares ML, Werbajh S, Avendaño-Vázquez LA, Rechberger GN, Kühnlein RP, Marino-Buslje C, Cantera R, Rezaval C, Ceriani MF. Orsai, the Drosophila homolog of human ETFRF1, links lipid catabolism to growth control. BMC Biology. 2022;20(1):233. https://doi.org/10.1186/s12915-022-01417-w  Research article  PubMed

Hurley MJ, Urra C, Garduno BM, Bruno A, Kimbell A, Wilkinson B, Marino-Buslje C, Ezquer M, Ezquer F, Aburto PF, Poulin E, Vásquez RA, Deacon R, Avila A, Altimiras F, Whitney Vanderklish P, Zampieri G, Angione C, Constantino G, Holmes TC, Coba MP, Xu X, Cogram P. Genome Sequencing Variations in the Octodon degus, an Unconventional Natural Model of Aging and Alzheimer's Disease. Frontiers in Aging Neuroscience. 2022;14:894994. https://doi.org/10.3389/fnagi.2022.894994  Research article   PubMed

Navarro AM, Orti F, Martínez-Pérez E, Alonso M, Simonetti FL, Iserte JA, Marino-Buslje C. DisPhaseDB: An integrative database of diseases related variations in liquid-liquid phase separation proteins. Computational and Structural Biotechnology Journal. 2022;20:2551-2557. https://doi.org/10.1016/j.csbj.2022.05.004 Database article  PubMed

Quaglia F, Mészáros B, Salladini E, Hatos A, Pancsa R, Chemes LB, Pajkos M, Lazar T, Peña-Díaz S, Santos J, Ács V, Farahi N, Fichó E, Aspromonte MC, Bassot C, Chasapi A, Davey NE, Davidovi? R, Dobson L, Elofsson A, Erd?s G, Gaudet P, Giglio M, Glavina J, Iserte J, Iglesias V, Kálmán Z, Lambrughi M, Leonardi E, Longhi S, Macedo-Ribeiro S, Maiani E, Marchetti J, Marino-Buslje C, Mészáros A, Monzón AM, Minervini G, Nadendla S, Nilsson JF, Novotný M, Ouzounis CA, Palopoli N, Papaleo E, Pereira PJB, Pozzati G, Promponas VJ, Pujols J, Rocha ACS, Salas M, Sawicki LR, Schad E, Shenoy A, Szaniszló T, Tsirigos KD, Veljkovic N, Parisi G, Ventura S, Dosztányi Z, Tompa P, Tosatto SCE, Piovesan D. DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation. Nucleic Acids Research. 2022;50(D1):D480-D487. https://doi.org/10.1093/nar/gkab1082      Research article PubMed      

Lazar T, Martínez-Pérez E, Quaglia F, Hatos A, Chemes LB, Iserte JA, Méndez NA, Garrone NA, Saldaño TE, Marchetti J, Rueda AJV, Bernadó P, Blackledge M, Cordeiro TN, Fagerberg E, Forman-Kay JD, Fornasari MS, Gibson TJ, Gomes GW, Gradinaru CC, Head-Gordon T, Jensen MR, Lemke EA, Longhi S, Marino-Buslje C, Minervini G, Mittag T, Monzón AM, Pappu RV, Parisi G, Ricard-Blum S, Ruff KM, Salladini E, Skepö M, Svergun D, Vallet SD, Varadi M, Tompa P, Tosatto SCE, Piovesan D. PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins. Nucleic Acids Research. 2021;49(D1):D404-D411. https://doi.org/10.1093/nar/gkaa1021 Research article PubMed

Martínez-Pérez E, Molina-Vila MA, Marino-Buslje C. Panels and models for accurate prediction of tumor mutation burden in tumor samples. NPJ Precision Oncology. 2021;5(1):31.  https://doi.org/10.1038/s41698-021-00169-0 Research article PubMed

Necci M, Piovesan D, CAID Predictors; DisProt Curators, Tosatto SCE, Marino-Buslje C, et al. Critical assessment of protein intrinsic disorder prediction. Nature Methods. 2021;18(5):472-481. https://doi.org/10.1038/s41592-021-01117-3   Research article  PubMed

Orti F, Navarro AM, Rabinovich A, Wodak SJ, Marino-Buslje C. Insight into membraneless organelles and their associated proteins: Drivers, clients and regulators. Computational and Structural Biotechnology Journal 2021;19:3964-3977. https://doi.org/10.1016/j.csbj.2021.06.042 Research article   PubMed