Martínez-Pérez E, Pajkos M, Tosatto SCE, Gibson TJ, Dosztanyi Z, Marino-Buslje C. Pipeline for transferring annotations between proteins beyond globular domains. Protein Sci. 32(7):e4655 (2023). doi: 10.1002/pro.4655.      PubMed

Piovesan D, Del Conte A, Clementel D, Monzon AM, Bevilacqua M, Aspromonte MC, Iserte JA, Orti FE, Marino-Buslje C, Tosatto SCE. MobiDB: 10 years of intrinsically disordered proteins. Nucleic Acids Res. 51(D1):D438-D444. (2023). doi: 10.1093/nar/gkac1065.      PubMed

Zea DJ, Teppa E, Marino-Buslje C. Easy Not Easy: Comparative Modeling with High-Sequence Identity Templates. Methods Mol Biol. 2627:83-100 (2023). doi: 10.1007/978-1-0716-2974-1_5.     PubMed      Protocol

Fernandez-Acosta M, Romero JI, Bernabó G, Velázquez-Campos GM, Gonzalez N, Mares ML, Werbajh S, Avendaño-Vázquez LA, Rechberger GN, Kühnlein RP, Marino-Buslje C, Cantera R, Rezaval C, Ceriani MF. Orsai, the Drosophila homolog of human ETFRF1, links lipid catabolism to growth control. BMC Biol. 20(1):233 (2022). doi: 10.1186/s12915-022-01417-w.      PubMed

Hurley MJ, Urra C, Garduno BM, Bruno A, Kimbell A, Wilkinson B, Marino-Buslje C, Ezquer M, Ezquer F, Aburto PF, Poulin E, Vasquez RA, Deacon R, Avila A, Altimiras F, Whitney Vanderklish P, Zampieri G, Angione C, Constantino G, Holmes TC, Coba MP, Xu X, Cogram P. Genome Sequencing Variations in the Octodon degus, an Unconventional Natural Model of Aging and Alzheimer's Disease. Front Aging Neurosci. 14:894994 (2022). doi: 10.3389/fnagi.2022.894994.      PubMed

Navarro AM, Orti F, Martínez-Pérez E, Alonso M, Simonetti FL, Iserte JA, Marino-Buslje C. DisPhaseDB: An integrative database of diseases related variations in liquid-liquid phase separation proteins. Comput Struct Biotechnol J. 20:2551-2557 (2022). doi: 10.1016/j.csbj.2022.05.004.      PubMed

Quaglia F, Mészáros B, Salladini E, Hatos A, Pancsa R, Chemes LB, Pajkos M, Lazar T, Peña-Díaz S, Santos J, Ács V, Farahi N, Fichó E, Aspromonte MC, Bassot C, Chasapi A, Davey NE, Davidovi? R, Dobson L, Elofsson A, Erd?s G, Gaudet P, Giglio M, Glavina J, Iserte J, Iglesias V, Kálmán Z, Lambrughi M, Leonardi E, Longhi S, Macedo-Ribeiro S, Maiani E, Marchetti J, Marino-Buslje C, Mészáros A, Monzon AM, Minervini G, Nadendla S, Nilsson JF, Novotný M, Ouzounis CA, Palopoli N, Papaleo E, Pereira PJB, Pozzati G, Promponas VJ, Pujols J, Rocha ACS, Salas M, Sawicki LR, Schad E, Shenoy A, Szaniszló T, Tsirigos KD, Veljkovic N, Parisi G, Ventura S, Dosztányi Z, Tompa P, Tosatto SCE, Piovesan D. DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation. Nucleic Acids Res. 50(D1):D480-D487 (2022). doi: 10.1093/nar/gkab1082.      PubMed     

Lazar T, Martínez-Pérez E, Quaglia F, Hatos A, Chemes LB, Iserte JA, Méndez NA, Garrone NA, Saldaño TE, Marchetti J, Rueda AJV, Bernadó P, Blackledge M, Cordeiro TN, Fagerberg E, Forman-Kay JD, Fornasari MS, Gibson TJ, Gomes GW, Gradinaru CC, Head-Gordon T, Jensen MR, Lemke EA, Longhi S, Marino-Buslje C, Minervini G, Mittag T, Monzon AM, Pappu RV, Parisi G, Ricard-Blum S, Ruff KM, Salladini E, Skepö M, Svergun D, Vallet SD, Varadi M, Tompa P, Tosatto SCE, Piovesan D. PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins. Nucleic Acids Res. 49(D1):D404-D411 (2021). doi: 10.1093/nar/gkaa1021.      PubMed

Martínez-Pérez E, Molina-Vila MA, Marino-Buslje C. Panels and models for accurate prediction of tumor mutation burden in tumor samples. NPJ Precis Oncol. 5(1):31 (2021). doi: 10.1038/s41698-021-00169-0.    PubMed

Necci M, Piovesan D, CAID Predictors; DisProt Curators, Tosatto SCE, Marino Buslje C, et al. Critical assessment of protein intrinsic disorder prediction. Nat Methods. 18(5):472-481 (2021). doi: 10.1038/s41592-021-01117-3.      PubMed

Orti F, Navarro AM, Rabinovich A, Wodak SJ, Marino-Buslje C. Insight into membraneless organelles and their associated proteins: Drivers, Clients and Regulators. Comput Struct Biotechnol J. 19:3964-3977 (2021). doi: 10.1016/j.csbj.2021.06.042      PubMed

García Bossi J, Kumar K, Barberini ML, Domínguez GD, Rondón Guerrero YDC, Marino-Buslje C, Obertello M, Muschietti JP, Estevez JM. The role of P-type IIA (ECA) and P-type IIB (ACA) Ca2+-ATPases in plant development and growth. J Exp Bot. 71(4):1239-1248 (2020). doi: 10.1093/jxb/erz521.       PubMed

Hatos A, Hajdu-Soltész B, Monzon AM, Palopoli N, Álvarez L, Aykac-Fas B, Bassot C, Benítez GI, Bevilacqua M, Chasapi A, Chemes L, Davey NE, Davidovi? R, Dunker AK, Elofsson A, Gobeill J, Foutel NSG, Sudha G, Guharoy M, Horvath T, Iglesias V, Kajava AV, Kovacs OP, Lamb J, Lambrughi M, Lazar T, Leclercq JY, Leonardi E, Macedo-Ribeiro S, Macossay-Castillo M, Maiani E, Manso JA, Marino-Buslje C, Martínez-Pérez E, Mészáros B, Mi?eti? I, Minervini G, Murvai N, Necci M, Ouzounis CA, Pajkos M, Paladin L, Pancsa R, Papaleo E, Parisi G, Pasche E, Barbosa Pereira PJ, Promponas VJ, Pujols J, Quaglia F, Ruch P, Salvatore M, Schad E, Szabo B, Szaniszló T, Tamana S, Tantos A, Veljkovic N, Ventura S, Vranken W, Dosztányi Z, Tompa P, Tosatto SCE, Piovesan D. DisProt: intrinsic protein disorder annotation in 2020. Nucleic Acids Res. 48(D1):D269-D276 (2020). doi: 10.1093/nar/gkz975.      PubMed

Iserte JA, Lazar T, Tosatto SCE, Tompa P, Marino-Buslje C. Chasing coevolutionary signals in intrinsically disordered proteins complexes. Sci Rep. 10(1):17962 (2020). doi: 10.1038/s41598-020-74791-6.      PubMed

Palopoli N, Iserte JA, Chemes LB, Marino-Buslje C, Parisi G, Gibson TJ, Davey NE. The articles.ELM resource: simplifying access to protein linear motif literature by annotation, text-mining and classification. Database. 2020:baaa040 (2020). doi: 10.1093/database/baaa040.      PubMed