Beckel MS, San Martín A, Sánchez SE, Seymour DK, de Leone MJ, Careno DA, Mora-García S, Weigel D, Yanovsky MJ, Chernomoretz A. Arabidopsis PRMT5 buffers pre-mRNA splicing and development against genetic variation in donor splice sites. New Phytologist. 2025;247(4):1727-1741. https://doi.org/10.1111/nph.70293  Research article

Lukin J, Beckel MS, Pedroncini O, Giusti SA, Di Mauro GC, Linenberg IM, Patop IL, Chernomoretz A, Marín-Burgín A, Kadener S, Refojo D. Neuronal activity-dependent gene expression is stimulus-specific and changes with neuronal maturation. Frontiers in Molecular Neuroscience. 2025;18:1609772. https://doi.org/10.3389/fnmol.2025.1609772 Research article

Marsico F, Sibilla G, Escobar MS, Chernomoretz A. The missing person problem through the lens of information theory. Forensic Science International: Genetics. 2024;70:103025. https://doi.org/10.1016/j.fsigen.2024.103025  Research article  PubMed

Rasetto NB, Giacomini D, Berardino AA, Waichman TV, Beckel MS, Di Bella DJ, Brown J, Davies-Sala MG, Gerhardinger C, Lie DC, Arlotta P, Chernomoretz A, Schinder AF. Transcriptional dynamics orchestrating the development and integration of neurons born in the adult hippocampus. Science Advances. 2024;10(29):eadp6039. https://doi.org/10.1126/sciadv.adp6039  Research article  PubMed

Waichman TV, Vercesi ML, Berardino AA, Beckel MS, Giacomini D, Rasetto NB, Herrero M, Di Bella DJ, Arlotta P, Schinder AF, Chernomoretz A. scX: a user-friendly tool for scRNAseq exploration. Bioinformatics Advances 2024;4(1):vbae062. https://doi.org/10.1093/bioadv/vbae062  Research article  Pubmed

Beckel M, Kaufman B, Yanovsky MJ, Chernomoretz A. Conserved and divergent signals in 5' splice site sequences across fungi, metazoa and plants. PLoS Computational Biology. 2023;19(10):e1011540.   https://doi.org/10.1371/journal.pcbi.1011540  Research article  PubMed

Chernomoretz A, Marsico F, Iserte J, Herrera-Piñero M, Escobar MS, Balparda M, Sibilla G. Bayesian networks for DNA-based kinship analysis: Functionality and validation of the GENis missing person identification module. Forensic Science International: Genetics Supplement Series. 2022;8:131-132. https://doi.org/10.1016/j.fsigss.2022.10.008 Full length article

Danko D, et al; International MetaSUB Consortium. A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell. 2021;184(13):3376-3393.e17. https://doi.org/10.1016/j.cell.2021.05.002 Research article  PubMed

Mancini E, Ravinovich A, Iserte J, Yanovsky M, Chernomoretz A. ASpli: Integrative analysis of splicing landscapes through RNA-Seq assays. Bioinformatics. 2021;37(17):2609-2616. https://doi.org/10.1093/bioinformatics/btab141  Research article  PubMed

Chernomoretz A, Balpardad M, La Grutta L, Calabrese A, Martínez G, Escobar MS, Sibillad G. GENis, an open-source multi-tier forensic DNA information system. Forensic Science International; Reports. 2020;2:100132.       https://doi.org/10.1016/j.fsir.2020.100132  Research article

Urán-Landaburu L, Berenstein AJ, Videla S, Maru P, Shanmugam D, Chernomoretz A, Agüero F. TDR Targets 6: driving drug discovery for human pathogens through intensive chemogenomic data integration. Nucleic Acids Research. 2020;48(D1):D992-D1005. https://doi.org/10.1093/nar/gkz999 Research article PubMed

Menden MP, Wang D, Mason MJ, Szalai B, Bulusu KC, Guan Y, Yu T, Kang J, Jeon M, Wolfinger R, Nguyen T, Zaslavskiy M; AstraZeneca-Sanger Drug Combination DREAM Consortium, Jang IS, Ghazoui Z, Ahsen ME, Vogel R, Neto EC, Norman T, Tang EKY, Garnett MJ, Veroli GYD, Fawell S, Stolovitzky G, Guinney J, Dry JR, Saez-Rodríguez J, Chernomoretz A, et al. Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen. Nature Communications. 2019;10(1):2674. https://doi.org/10.1038/s41467-019-09799-2 Research article  PubMed

Altszyler E, Ventura AC, Colman-Lerner A, Chernomoretz A. Ultrasensitivity in signaling cascades revisited: Linking local and global ultrasensitivity estimations. PLoS One. 2017;12(6):e0180083.  https://doi.org/10.1371/journal.pone.0180083 Research article PubMed

Palopoli N, Monzón AM, Parisi G, Chernomoretz A, Agüero F.  A report on the “International Society for Computational Biology - Latin America (ISCB-LA)” Bioinformatics Conference 2016. EMBnet. Journal. 2017;v23:e883. https://doi.org/10.14806/ej.23.0.883 Report 

Berenstein AJ, Magariños MP, Chernomoretz A, Agüero F. A Multilayer Network Approach for Guiding Drug Repositioning in Neglected Diseases. PLoS Neglected Tropical Diseases.. 2016;10:e0004300. https://doi.org/10.1371/journal.pntd.0004300  Research article   PubMed