Research area
Cell and developmental biology

RNA CELL BIOLOGY

Research

An emerging concept in post-transcriptional regulation is the formation of biomolecular condensates, also termed membraneless organelles (MLOs). Stress Granules (SGs), Processing bodies (PBs) and a growing number of additional MLOs that contain transcripts in association with scaffold and regulatory proteins affect RNA processing, stability, localization and translation. We aim to uncover how the condensation and dissolution of diverse MLOs is governed by physiological clues and how this impacts
cellular function.
We have discovered synaptic MLOs that selectively release or sequester mRNAs to regulate local translation downstream of neuronal activation. We identified the role of molecular motors in SG assembly and disassembly, and our current work underscores additional cellular pathways for SG regulation. Our recent findings highlight the relevance of MLOs formed by the conserved RNA regulator Smaug, which were originally described in our lab, to mitochondrial function. Importantly, Smaug MLOs respond to the non-canonical activation of Smoothened, an emerging pathway for metabolic control. This underscores a novel arm for the regulation of cell energetics that implicates the condensation of RNA regulators.

Skills & tools

Our lab combines cell biology, imaging, biochemical and molecular techniques to study MLOs and mRNA regulation. We use cultured mammalian cell lines as well as Drosophila experimental models. Live-cell and high-resolution microscopy allow us to track the condensation and dissolution of a number of MLOs, and state-of-the-art image analysis provides robust quantifications of the phenomena under study. This integrative approach enables us to link MLOs’ dynamics with their functional roles in post-transcriptional regulation and cell physiology.

Collaboration interests

  • Imaging
  •  RNA sequencing
  • Energy metabolism
  • Drug discovery

Selected publications

  • THOMAS, María Gabriela, et al. The non-canonical Smoothened-AMPK axis regulates Smaug1 biomolecular condensates. Journal of Cell Science, 2025, vol. 138, no 5, p. JCS263433.

  • FERNÁNDEZ-ALVAREZ, Ana J., et al. Smaug1 membraneless organelles respond to AMPK and mTOR and affect mitochondrial function. Journal of Cell Science, 2022, vol. 135, no 1, p. jcs253591.

  • BRUZZONE, Lucia, et al. Regulation of the RNA‐binding protein Smaug by the GPCR smoothened via the kinase fused. EMBO reports, 2020, vol. 21, no 7, p. e48425.

Principal investigator

Graciela L. Boccaccio, PhD