Research area
Neuroscience
Research area
Neuroscience

IDENTITY AND NEURAL DEVELOPMENT

Research

Neurons in the mammalian brain are a diverse and heterogenous population, critical to the execution of the most sophisticated functions. Their diversity underlies the complexity of the cerebral function, as well as distinct susceptibilities to disease and neurodevelopmental disorders. Our lab is interested in understanding how the collection of different excitatory neurons in the cerebral cortex are generated and how their specificity is established. To address this big and fundamental question we are first focusing on inter and extracellular mechanisms. In one of our new projects we have identified that different classes of neurons express distinct extracellular matrix (ECM) genes and modifiers. We are working to characterize this specificity and its role in the establishment of neuronal identity and the correct neuronal circuits. Given that some of these genes have been associated to neurodevelopmental disorders, such as Autism Spectrum Disorder (ASD), we will also study cell type-specific production of ECM in the context of ASD models. We use the laboratory mouse as our main model system, as it shares with humans most of the processes and cell types occurring during development. We are now incorporating in vitro models of human brain development (organoids), as well as work with human samples to complement and validate our work. Our approaches combine the use of classic and solid developmental neuroscience tools with the use of high-throughput single cell genomics.

Skills & tools

We have a strong background in developmental neuroscience using a diverse array of tools and techniques. We have developed a strong expertise on single cell genomics, including single cell RNA sequencing, ATAC sequencing and shared RNA-ATAC sequencing, from tissue preparation, data and library generation, sequencing and data analysis and interpretation. We combine mouse genetics and in utero electroporations to specifically label and perturb cell types and gene expression in vivo in the mouse brain, with temporal and spatial control. Bringing together in vivo perturbations with high-throughput genomic tools, we develop and apply in vivo screening strategies (CRISPR, overexpression) to address questions related to brain development and function. We are implementing the use of human brain organoids, an in vitro model of the developing human brain, for the study of human cortical development and neuronal heterogeneity.

Collaboration interests

  • Spatial transcriptomics
  • Proteomics and glycomics
  • Human brain genomics and development
  • Live imaging

Selected publications

  • DI BELLA, Daniela J., et al. Molecular logic of cellular diversification in the mouse cerebral cortex. Nature, 2021, vol. 595, no 7868, p. 554-559.

  • MATHO, Katherine S., et al. Genetic dissection of the glutamatergic neuron system in cerebral cortex. Nature, 2021, vol. 598, no 7879, p. 182-187.

  • DI BELLA, Daniela J., et al. Making Ramón y Cajal proud: Development of cell identity and diversity in the cerebral cortex. Neuron, 2024, vol. 112, no 13, p. 2091-2111.

  • ANTÓN-BOLAÑOS, Noelia, et al. Brain Chimeroids reveal individual susceptibility to neurotoxic triggers. Nature, 2024, vol. 631, no 8019, p. 142-149.

Principal investigator

Daniela Di Bella